link failure and blackhole scenarios seem to work
diff --git a/examples/link-failure-sprint.cc b/examples/link-failure-sprint.cc
index dfbbf04..421f134 100644
--- a/examples/link-failure-sprint.cc
+++ b/examples/link-failure-sprint.cc
@@ -26,6 +26,8 @@
 #include "ns3/point-to-point-grid.h"
 #include "ns3/ipv4-global-routing-helper.h"
 #include "ns3/random-variable.h"
+#include "ns3/ccnx-l3-protocol.h"
+#include "ns3/topology-reader.h"
 
 #include <iostream>
 #include <sstream>
@@ -54,35 +56,37 @@
 class Experiment
 {
 public:
+  Experiment ()
+  : m_reader ("/sprint") { }
+
   void
   ConfigureTopology ()
   {
+    Names::Clear ();
+    
     string weights   ("./src/NDNabstraction/examples/sprint-pops.weights");
     string latencies ("./src/NDNabstraction/examples/sprint-pops.latencies");
     string positions ("./src/NDNabstraction/examples/sprint-pops.positions");
-    string strategy  ("ns3::CcnxBestRouteStrategy");
-    // string strategy ("ns3::CcnxFloodingStrategy");
   
-    RocketfuelWeightsReader reader ("/sprint");
-    m_reader = reader;
-    
-    reader.SetFileName (positions);
-    reader.SetFileType (RocketfuelWeightsReader::POSITIONS);
-    reader.Read ();
-  
-    reader.SetFileName (weights);
-    reader.SetFileType (RocketfuelWeightsReader::WEIGHTS);    
-    reader.Read ();
+    //RocketfuelWeightsReader reader ("/sprint");
 
-    reader.SetFileName (latencies);
-    reader.SetFileType (RocketfuelWeightsReader::LATENCIES);    
-    reader.Read ();
+    m_reader.SetFileName (positions);
+    m_reader.SetFileType (RocketfuelWeightsReader::POSITIONS);
+    m_reader.Read ();
+  
+    m_reader.SetFileName (weights);
+    m_reader.SetFileType (RocketfuelWeightsReader::WEIGHTS);    
+    m_reader.Read ();
+
+    m_reader.SetFileName (latencies);
+    m_reader.SetFileType (RocketfuelWeightsReader::LATENCIES);    
+    m_reader.Read ();
     
-    reader.Commit ();
-    NS_ASSERT_MSG (reader.LinksSize () != 0, "Problems reading the topology file. Failing.");
+    m_reader.Commit ();
+    NS_ASSERT_MSG (m_reader.LinksSize () != 0, "Problems reading the topology file. Failing.");
     
-    NS_LOG_INFO("Nodes = " << reader.GetNodes ().GetN());
-    NS_LOG_INFO("Links = " << reader.LinksSize ());
+    NS_LOG_INFO("Nodes = " << m_reader.GetNodes ().GetN());
+    NS_LOG_INFO("Links = " << m_reader.LinksSize ());
   
     // ------------------------------------------------------------
     // -- Read topology data.
@@ -91,23 +95,29 @@
     InternetStackHelper stack;
     Ipv4GlobalRoutingHelper ipv4RoutingHelper ("ns3::Ipv4GlobalRoutingOrderedNexthops");
     stack.SetRoutingHelper (ipv4RoutingHelper);
-    stack.Install (reader.GetNodes ());
+    stack.Install (m_reader.GetNodes ());
 
-    reader.AssignIpv4Addresses (Ipv4Address ("10.0.0.0"));
-
+    m_reader.AssignIpv4Addresses (Ipv4Address ("10.0.0.0"));
+    
     // Install CCNx stack
     NS_LOG_INFO ("Installing CCNx stack");
     CcnxStackHelper ccnxHelper;
-    ccnxHelper.SetForwardingStrategy (strategy);
+    ccnxHelper.SetForwardingStrategy ("ns3::CcnxBestRouteStrategy");
     ccnxHelper.EnableLimits (true, Seconds(0.1));
     ccnxHelper.SetDefaultRoutes (false);
     ccnxHelper.InstallAll ();
+    
+    m_rand = UniformVariable (0, m_reader.GetNodes ().GetN());
+    //m_linkRand = UniformVariable(0, m_reader.LinksSize());
+  }
 
+  void
+  ConfigureRouting ()
+  {
+    CcnxStackHelper ccnxHelper;
     // // Populate FIB based on IPv4 global routing controller
     ccnxHelper.InstallFakeGlobalRoutes ();
     ccnxHelper.InstallRoutesToAll ();
-
-    m_rand = UniformVariable (0, reader.GetNodes ().GetN());
   }
 
 public:  
@@ -122,131 +132,164 @@
     cout << "Done.\n";
   }
 
+  void
+  FailLinks(double threshold)
+  {
+    NS_LOG_INFO("Failing links");
+    m_linkRand = UniformVariable(0, 1.0);
+    double probability = 0.0;
+    
+    BOOST_FOREACH (const TopologyReader::Link &link, m_reader.GetLinks())
+      {
+        probability = m_linkRand.GetValue();
+        NS_LOG_INFO ("Probability = " << probability);
+        
+        if(probability <= threshold)
+          {
+            Ptr<Node> fromNode = link.GetFromNode ();
+            Ptr<Node> toNode = link.GetToNode ();
+            NS_LOG_INFO("From node id = " << fromNode->GetId());
+            NS_LOG_INFO("To node id = " << toNode->GetId());
+            
+            Ptr<CcnxL3Protocol> fromCcnx = fromNode->GetObject<CcnxL3Protocol> ();
+            Ptr<CcnxL3Protocol> toCcnx = toNode->GetObject<CcnxL3Protocol> (); 
+          
+            Ptr<NetDevice> fromDevice = link.GetFromNetDevice ();
+            Ptr<NetDevice> toDevice = link.GetToNetDevice ();
+          
+            Ptr<CcnxFace> fromFace = fromCcnx->GetFaceByNetDevice (fromDevice);
+            Ptr<CcnxFace> toFace = toCcnx->GetFaceByNetDevice (toDevice);
+          
+            NS_LOG_INFO("From face id = " << fromFace->GetId());
+            NS_LOG_INFO("To face id = " << toFace->GetId());
+            fromFace->SetUp (false);
+            toFace->SetUp (false);
+            
+            NS_LOG_INFO(fromFace->IsUp());
+            NS_LOG_INFO(toFace->IsUp());
+          }
+
+      }
+    /*
+    uint32_t nodeId = m_rand.GetValue ();
+    Ptr<Node> node = Names::Find<Node> ("/sprint", lexical_cast<string> (nodeId));
+    
+    Ptr<CcnxL3Protocol> ccnx = node->GetObject<CcnxL3Protocol> ();
+    UniformVariable faceRandom = UniformVariable (0, ccnx->GetNFaces ());
+    uint32_t faceId = faceRandom.GetValue();
+    Ptr<CcnxFace> face = ccnx->GetFace (faceId);
+    face->SetUp(false);
+    */
+  }
+
   //We are creating "everybody-to-everybody" usage pattern
   ApplicationContainer
   AddApplications()
   {
+    NS_LOG_INFO("Adding applications");
+    NS_LOG_INFO("GetN = " << m_reader.GetNodes().GetN());
+    
     ApplicationContainer apps;
-    for(int i =0; i<reader.GetNodes().GetN(); i++;)
+    for(uint32_t i = 0; i<m_reader.GetNodes().GetN(); i++)
     {
-      Ptr<Node> node1 = Names::Find<Node> ("/sprint", lexical_cast<string> (node1_num));
+      NS_LOG_INFO("i="<<i);
+      Ptr<Node> node1 = Names::Find<Node> ("/sprint", lexical_cast<string> (i));
+        
       CcnxAppHelper producerHelper ("ns3::CcnxProducer");
-      producerHelper.SetPrefix ("/" + lexical_cast<string> (i));
+      producerHelper.SetPrefix ("/" + lexical_cast<string> (node1->GetId ()));
         
       apps.Add(producerHelper.Install (node1));
-          
-      for(int j = 0; j<reader.GetNodes().GetN();j++)
+            
+      for(uint32_t j = 0; j<m_reader.GetNodes().GetN();j++)
       {
+        NS_LOG_INFO("j="<<j);
         if(i==j)
           continue;
         
-        Ptr<Node> node2 = Names::Find<Node> ("/sprint", lexical_cast<string> (node2_num));
-        
+        Ptr<Node> node2 = Names::Find<Node> ("/sprint", lexical_cast<string> (j));
+          
         CcnxAppHelper consumerHelper ("ns3::CcnxConsumer");
-        consumerHelper.SetPrefix ("/" + lexical_cast<string> (i));
-        consumerHelper.SetAttribute ("MeanRate", StringValue ("2Mbps"));
+        consumerHelper.SetPrefix ("/" + lexical_cast<string> (node1->GetId ()));
+        consumerHelper.SetAttribute ("MeanRate", StringValue ("1Kbps"));
         consumerHelper.SetAttribute ("Size", StringValue ("2"));  
         
         apps.Add(consumerHelper.Install (node2));
       }
     }
-    return apps;
-  }
-
-  ApplicationContainer
-  AddRandomApplications (uint16_t numStreams)
-  {
-    map<uint32_t, set<uint32_t> > streams;
-    ApplicationContainer apps;
     
-    uint16_t createdStreams = 0;
-    uint16_t guard = 0;
-    while (createdStreams < numStreams && guard < (numeric_limits<uint16_t>::max ()-1))
-      {
-        guard ++;
-        
-        uint32_t node1_num = m_rand.GetValue ();
-        uint32_t node2_num = m_rand.GetValue ();
-
-        if (node1_num == node2_num)
-          continue;
-
-        if (streams[node1_num].count (node2_num) > 0) // don't create duplicate streams
-          continue;
-        
-        streams[node1_num].insert (node2_num);
-
-        Ptr<Node> node1 = Names::Find<Node> ("/sprint", lexical_cast<string> (node1_num));
-        Ptr<Node> node2 = Names::Find<Node> ("/sprint", lexical_cast<string> (node2_num));
-
-        CcnxAppHelper consumerHelper ("ns3::CcnxConsumer");
-        consumerHelper.SetPrefix ("/" + lexical_cast<string> (node2->GetId ()));
-        consumerHelper.SetAttribute ("MeanRate", StringValue ("2Mbps"));
-        consumerHelper.SetAttribute ("Size", StringValue ("2"));
-
-        CcnxAppHelper producerHelper ("ns3::CcnxProducer");
-        producerHelper.SetPrefix ("/" + lexical_cast<string> (node2->GetId ()));
-        
-        apps.Add
-          (consumerHelper.Install (node1));
-
-        apps.Add
-          (producerHelper.Install (node2));
-
-        createdStreams ++;
-      }
-
     return apps;
   }
 
-
   UniformVariable m_rand;
-  
-private:
+  UniformVariable m_linkRand;
   RocketfuelWeightsReader m_reader;
 };
 
 int 
 main (int argc, char *argv[])
 {
-  cout << "Begin congestion-pop scenario\n";
+  cout << "Begin link failure scenario\n";
   
-  Config::SetDefault ("ns3::PointToPointNetDevice::DataRate", StringValue ("1Mbps"));
-  Config::SetDefault ("ns3::DropTailQueue::MaxPackets", StringValue ("20"));
+  Config::SetDefault ("ns3::PointToPointNetDevice::DataRate", StringValue ("10Mbps"));
+  Config::SetDefault ("ns3::DropTailQueue::MaxPackets", StringValue ("100"));
 
-  Time finishTime = Seconds (20.0);
+  Time finishTime1 = Seconds (5.0);
+  Time finishTime2 = Seconds (20.0);
 
   CommandLine cmd;
-  cmd.AddValue ("finish", "Finish time", finishTime);
+  cmd.AddValue ("finish", "Finish time", finishTime1);
   cmd.Parse (argc, argv);
 
   Experiment experiment;
 
-  for (uint32_t i = 0; i < 100; i++)
+  for (uint32_t i = 0; i < 80; i++)
     {
+      Config::SetGlobal ("RngRun", IntegerValue (i));
+      cout << "seed = " << SeedManager::GetSeed () << ", run = " << SeedManager::GetRun () << endl;
+
+      Experiment experiment;
+      cout << "Run " << i << endl;
+      
+      string prefix = "run-" + lexical_cast<string> (i) + "-";
   
+      //before link failure
       experiment.ConfigureTopology ();
       ApplicationContainer apps = experiment.AddApplications ();
+      experiment.ConfigureRouting ();
+      //tracing
+      //...
+      //experiment.Run (finishTime1);
+      
+      //after link failure 
+      experiment.FailLinks(0.1);
+      
+      //tracing
+      CcnxTraceHelper traceHelper;
+      traceHelper.EnableRateL3All (prefix + "rate-trace.log");
+      traceHelper.EnableSeqsAppAll ("ns3::CcnxConsumer", prefix + "consumers-seqs.log");
+      //...
+      experiment.Run (finishTime2);
 
+/*
       for (uint32_t i = 0; i < apps.GetN () / 2; i++) 
         {
           cout << "From " << apps.Get (i*2)->GetNode ()->GetId ()
                << " to "  << apps.Get (i*2 + 1)->GetNode ()->GetId ();
           cout << "\n";
-        }
+        }*/
   
-      CcnxTraceHelper traceHelper;
+      //CcnxTraceHelper traceHelper;
       // traceHelper.EnableAggregateAppAll ("ns3::CcnxConsumer");
       // traceHelper.EnableAggregateAppAll ("ns3::CcnxProducer");
       // traceHelper.EnableAggregateL3All ();
       // traceHelper.SetL3TraceFile ("trace-l3.log");
       // traceHelper.SetAppTraceFile ("trace-app.log");
       // traceHelper.EnableRateL3All ("rate-trace.log");
-      traceHelper.EnableSeqsAppAll ("ns3::CcnxConsumer", "consumers-seqs.log");
+      //traceHelper.EnableSeqsAppAll ("ns3::CcnxConsumer", "consumers-seqs.log");
 
-      experiment.Run (finishTime);
+      
     }
 
-  cout << "Finish congestion-pop scenario\n";
+  cout << "Finish link failure scenario\n";
   return 0;
 }