build: Making build system consistent with other NDN projects and adding unit-test framework

This commit aims only at correcting building system and adding unit-test framework.
Existing test cases (ChronoSync) are disabled temporarily and will be fixed later.
Minimum changes are made, so that the code can be built successfully.
Compiling warnings will be resolved in a later commit.

Refs: #1495

Change-Id: Ibf7119bbd77b6307cb58bbee47b61d7a7312df98
diff --git a/.waf-tools/boost.py b/.waf-tools/boost.py
new file mode 100644
index 0000000..305945a
--- /dev/null
+++ b/.waf-tools/boost.py
@@ -0,0 +1,378 @@
+#!/usr/bin/env python
+# encoding: utf-8
+#
+# partially based on boost.py written by Gernot Vormayr
+# written by Ruediger Sonderfeld <ruediger@c-plusplus.de>, 2008
+# modified by Bjoern Michaelsen, 2008
+# modified by Luca Fossati, 2008
+# rewritten for waf 1.5.1, Thomas Nagy, 2008
+# rewritten for waf 1.6.2, Sylvain Rouquette, 2011
+
+'''
+
+This is an extra tool, not bundled with the default waf binary.
+To add the boost tool to the waf file:
+$ ./waf-light --tools=compat15,boost
+	or, if you have waf >= 1.6.2
+$ ./waf update --files=boost
+
+When using this tool, the wscript will look like:
+
+	def options(opt):
+		opt.load('compiler_cxx boost')
+
+	def configure(conf):
+		conf.load('compiler_cxx boost')
+		conf.check_boost(lib='system filesystem')
+
+	def build(bld):
+		bld(source='main.cpp', target='app', use='BOOST')
+
+Options are generated, in order to specify the location of boost includes/libraries.
+The `check_boost` configuration function allows to specify the used boost libraries.
+It can also provide default arguments to the --boost-static and --boost-mt command-line arguments.
+Everything will be packaged together in a BOOST component that you can use.
+
+When using MSVC, a lot of compilation flags need to match your BOOST build configuration:
+ - you may have to add /EHsc to your CXXFLAGS or define boost::throw_exception if BOOST_NO_EXCEPTIONS is defined.
+   Errors: C4530
+ - boost libraries will try to be smart and use the (pretty but often not useful) auto-linking feature of MSVC
+   So before calling `conf.check_boost` you might want to disabling by adding:
+   	conf.env.DEFINES_BOOST += ['BOOST_ALL_NO_LIB']
+   Errors:
+ - boost might also be compiled with /MT, which links the runtime statically.
+   If you have problems with redefined symbols,
+		self.env['DEFINES_%s' % var] += ['BOOST_ALL_NO_LIB']
+		self.env['CXXFLAGS_%s' % var] += ['/MD', '/EHsc']
+Passing `--boost-linkage_autodetect` might help ensuring having a correct linkage in some basic cases.
+
+'''
+
+import sys
+import re
+from waflib import Utils, Logs, Errors
+from waflib.Configure import conf
+
+BOOST_LIBS = ['/usr/lib', '/usr/local/lib', '/opt/local/lib', '/sw/lib', '/lib', '/usr/lib/x86_64-linux-gnu', '/usr/lib/i386-linux-gnu', '/usr/local/ndn/lib']
+BOOST_INCLUDES = ['/usr/include', '/usr/local/include', '/opt/local/include', '/sw/include', '/usr/local/ndn/include']
+BOOST_VERSION_FILE = 'boost/version.hpp'
+BOOST_VERSION_CODE = '''
+#include <iostream>
+#include <boost/version.hpp>
+int main() { std::cout << BOOST_LIB_VERSION << ":" << BOOST_VERSION << std::endl; }
+'''
+BOOST_SYSTEM_CODE = '''
+#include <boost/system/error_code.hpp>
+int main() { boost::system::error_code c; }
+'''
+BOOST_THREAD_CODE = '''
+#include <boost/thread.hpp>
+int main() { boost::thread t; }
+'''
+
+# toolsets from {boost_dir}/tools/build/v2/tools/common.jam
+PLATFORM = Utils.unversioned_sys_platform()
+detect_intel = lambda env: (PLATFORM == 'win32') and 'iw' or 'il'
+detect_clang = lambda env: (PLATFORM == 'darwin') and 'clang-darwin' or 'clang'
+detect_mingw = lambda env: (re.search('MinGW', env.CXX[0])) and 'mgw' or 'gcc'
+BOOST_TOOLSETS = {
+	'borland':  'bcb',
+	'clang':	detect_clang,
+	'como':	 'como',
+	'cw':	   'cw',
+	'darwin':   'xgcc',
+	'edg':	  'edg',
+	'g++':	  detect_mingw,
+	'gcc':	  detect_mingw,
+	'icpc':	 detect_intel,
+	'intel':	detect_intel,
+	'kcc':	  'kcc',
+	'kylix':	'bck',
+	'mipspro':  'mp',
+	'mingw':	'mgw',
+	'msvc':	 'vc',
+	'qcc':	  'qcc',
+	'sun':	  'sw',
+	'sunc++':   'sw',
+	'tru64cxx': 'tru',
+	'vacpp':	'xlc'
+}
+
+
+def options(opt):
+	opt = opt.add_option_group('Boost Options')
+
+	opt.add_option('--boost-includes', type='string',
+				   default='', dest='boost_includes',
+				   help='''path to the directory where the boost includes are, e.g., /path/to/boost_1_55_0/stage/include''')
+	opt.add_option('--boost-libs', type='string',
+				   default='', dest='boost_libs',
+				   help='''path to the directory where the boost libs are, e.g., /path/to/boost_1_55_0/stage/lib''')
+	opt.add_option('--boost-static', action='store_true',
+				   default=False, dest='boost_static',
+				   help='link with static boost libraries (.lib/.a)')
+	opt.add_option('--boost-mt', action='store_true',
+				   default=False, dest='boost_mt',
+				   help='select multi-threaded libraries')
+	opt.add_option('--boost-abi', type='string', default='', dest='boost_abi',
+				   help='''select libraries with tags (dgsyp, d for debug), see doc Boost, Getting Started, chapter 6.1''')
+	opt.add_option('--boost-linkage_autodetect', action="store_true", dest='boost_linkage_autodetect',
+				   help="auto-detect boost linkage options (don't get used to it / might break other stuff)")
+	opt.add_option('--boost-toolset', type='string',
+				   default='', dest='boost_toolset',
+				   help='force a toolset e.g. msvc, vc90, gcc, mingw, mgw45 (default: auto)')
+	py_version = '%d%d' % (sys.version_info[0], sys.version_info[1])
+	opt.add_option('--boost-python', type='string',
+				   default=py_version, dest='boost_python',
+				   help='select the lib python with this version (default: %s)' % py_version)
+
+
+@conf
+def __boost_get_version_file(self, d):
+	dnode = self.root.find_dir(d)
+	if dnode:
+		return dnode.find_node(BOOST_VERSION_FILE)
+	return None
+
+@conf
+def boost_get_version(self, d):
+	"""silently retrieve the boost version number"""
+	node = self.__boost_get_version_file(d)
+	if node:
+		try:
+			txt = node.read()
+		except (OSError, IOError):
+			Logs.error("Could not read the file %r" % node.abspath())
+		else:
+			re_but1 = re.compile('^#define\\s+BOOST_LIB_VERSION\\s+"(.+)"', re.M)
+			m1 = re_but1.search(txt)
+
+			re_but2 = re.compile('^#define\\s+BOOST_VERSION\\s+(\\d+)', re.M)
+			m2 = re_but2.search(txt)
+
+			if m1 and m2:
+				return (m1.group(1), m2.group(1))
+
+	return self.check_cxx(fragment=BOOST_VERSION_CODE, includes=[d], execute=True, define_ret=True).split(":")
+
+@conf
+def boost_get_includes(self, *k, **kw):
+	includes = k and k[0] or kw.get('includes', None)
+	if includes and self.__boost_get_version_file(includes):
+		return includes
+	for d in Utils.to_list(self.environ.get('INCLUDE', '')) + BOOST_INCLUDES:
+		if self.__boost_get_version_file(d):
+			return d
+	if includes:
+		self.end_msg('headers not found in %s' % includes)
+		self.fatal('The configuration failed')
+	else:
+		self.end_msg('headers not found, please provide a --boost-includes argument (see help)')
+		self.fatal('The configuration failed')
+
+
+@conf
+def boost_get_toolset(self, cc):
+	toolset = cc
+	if not cc:
+		build_platform = Utils.unversioned_sys_platform()
+		if build_platform in BOOST_TOOLSETS:
+			cc = build_platform
+		else:
+			cc = self.env.CXX_NAME
+	if cc in BOOST_TOOLSETS:
+		toolset = BOOST_TOOLSETS[cc]
+	return isinstance(toolset, str) and toolset or toolset(self.env)
+
+
+@conf
+def __boost_get_libs_path(self, *k, **kw):
+	''' return the lib path and all the files in it '''
+	if 'files' in kw:
+		return self.root.find_dir('.'), Utils.to_list(kw['files'])
+	libs = k and k[0] or kw.get('libs', None)
+	if libs:
+		path = self.root.find_dir(libs)
+		files = path.ant_glob('*boost_*')
+	if not libs or not files:
+		for d in Utils.to_list(self.environ.get('LIB', [])) + BOOST_LIBS:
+			path = self.root.find_dir(d)
+			if path:
+				files = path.ant_glob('*boost_*')
+				if files:
+					break
+			path = self.root.find_dir(d + '64')
+			if path:
+				files = path.ant_glob('*boost_*')
+				if files:
+					break
+	if not path:
+		if libs:
+			self.end_msg('libs not found in %s' % libs)
+			self.fatal('The configuration failed')
+		else:
+			self.end_msg('libs not found, please provide a --boost-libs argument (see help)')
+			self.fatal('The configuration failed')
+
+	self.to_log('Found the boost path in %r with the libraries:' % path)
+	for x in files:
+		self.to_log('    %r' % x)
+	return path, files
+
+@conf
+def boost_get_libs(self, *k, **kw):
+	'''
+	return the lib path and the required libs
+	according to the parameters
+	'''
+	path, files = self.__boost_get_libs_path(**kw)
+	t = []
+	if kw.get('mt', False):
+		t.append('mt')
+	if kw.get('abi', None):
+		t.append(kw['abi'])
+	tags = t and '(-%s)+' % '-'.join(t) or ''
+	toolset = self.boost_get_toolset(kw.get('toolset', ''))
+	toolset_pat = '(-%s[0-9]{0,3})+' % toolset
+	version = '(-%s)+' % self.env.BOOST_VERSION
+
+	def find_lib(re_lib, files):
+		for file in files:
+			if re_lib.search(file.name):
+				self.to_log('Found boost lib %s' % file)
+				return file
+		return None
+
+	def format_lib_name(name):
+		if name.startswith('lib') and self.env.CC_NAME != 'msvc':
+			name = name[3:]
+		return name[:name.rfind('.')]
+
+	libs = []
+	for lib in Utils.to_list(k and k[0] or kw.get('lib', None)):
+		py = (lib == 'python') and '(-py%s)+' % kw['python'] or ''
+		# Trying libraries, from most strict match to least one
+		for pattern in ['boost_%s%s%s%s%s' % (lib, toolset_pat, tags, py, version),
+						'boost_%s%s%s%s' % (lib, tags, py, version),
+						'boost_%s%s%s' % (lib, tags, version),
+						# Give up trying to find the right version
+						'boost_%s%s%s%s' % (lib, toolset_pat, tags, py),
+						'boost_%s%s%s' % (lib, tags, py),
+						'boost_%s%s' % (lib, tags)]:
+			self.to_log('Trying pattern %s' % pattern)
+			file = find_lib(re.compile(pattern), files)
+			if file:
+				libs.append(format_lib_name(file.name))
+				break
+		else:
+			self.end_msg('lib %s not found in %s' % (lib, path.abspath()))
+			self.fatal('The configuration failed')
+
+	return path.abspath(), libs
+
+
+@conf
+def check_boost(self, *k, **kw):
+	"""
+	Initialize boost libraries to be used.
+
+	Keywords: you can pass the same parameters as with the command line (without "--boost-").
+	Note that the command line has the priority, and should preferably be used.
+	"""
+	if not self.env['CXX']:
+		self.fatal('load a c++ compiler first, conf.load("compiler_cxx")')
+
+	params = {'lib': k and k[0] or kw.get('lib', None)}
+	for key, value in self.options.__dict__.items():
+		if not key.startswith('boost_'):
+			continue
+		key = key[len('boost_'):]
+		params[key] = value and value or kw.get(key, '')
+
+	var = kw.get('uselib_store', 'BOOST')
+
+	self.start_msg('Checking boost includes')
+	self.env['INCLUDES_%s' % var] = inc = self.boost_get_includes(**params)
+	versions = self.boost_get_version(inc)
+	self.env.BOOST_VERSION = versions[0]
+	self.env.BOOST_VERSION_NUMBER = int(versions[1])
+	self.end_msg("%d.%d.%d" % (int(versions[1]) / 100000,
+				   int(versions[1]) / 100 % 1000,
+				   int(versions[1]) % 100))
+	if Logs.verbose:
+		Logs.pprint('CYAN', '	path : %s' % self.env['INCLUDES_%s' % var])
+
+	if not params['lib']:
+		return
+	self.start_msg('Checking boost libs')
+	suffix = params.get('static', None) and 'ST' or ''
+	path, libs = self.boost_get_libs(**params)
+	self.env['%sLIBPATH_%s' % (suffix, var)] = [path]
+	self.env['%sLIB_%s' % (suffix, var)] = libs
+	self.end_msg('ok')
+	if Logs.verbose:
+		Logs.pprint('CYAN', '	path : %s' % path)
+		Logs.pprint('CYAN', '	libs : %s' % libs)
+
+
+	def try_link():
+		if 'system' in params['lib']:
+			self.check_cxx(
+			 fragment=BOOST_SYSTEM_CODE,
+			 use=var,
+			 execute=False,
+			)
+		if 'thread' in params['lib']:
+			self.check_cxx(
+			 fragment=BOOST_THREAD_CODE,
+			 use=var,
+			 execute=False,
+			)
+
+	if params.get('linkage_autodetect', False):
+		self.start_msg("Attempting to detect boost linkage flags")
+		toolset = self.boost_get_toolset(kw.get('toolset', ''))
+		if toolset in ['vc']:
+			# disable auto-linking feature, causing error LNK1181
+			# because the code wants to be linked against
+			self.env['DEFINES_%s' % var] += ['BOOST_ALL_NO_LIB']
+
+			# if no dlls are present, we guess the .lib files are not stubs
+			has_dlls = False
+			for x in Utils.listdir(path):
+				if x.endswith(self.env.cxxshlib_PATTERN % ''):
+					has_dlls = True
+					break
+			if not has_dlls:
+				self.env['STLIBPATH_%s' % var] = [path]
+				self.env['STLIB_%s' % var] = libs
+				del self.env['LIB_%s' % var]
+				del self.env['LIBPATH_%s' % var]
+
+			# we attempt to play with some known-to-work CXXFLAGS combinations
+			for cxxflags in (['/MD', '/EHsc'], []):
+				self.env.stash()
+				self.env["CXXFLAGS_%s" % var] += cxxflags
+				try:
+					try_link()
+					self.end_msg("ok: winning cxxflags combination: %s" % (self.env["CXXFLAGS_%s" % var]))
+					e = None
+					break
+				except Errors.ConfigurationError as exc:
+					self.env.revert()
+					e = exc
+
+			if e is not None:
+				self.end_msg("Could not auto-detect boost linking flags combination, you may report it to boost.py author", ex=e)
+				self.fatal('The configuration failed')
+		else:
+			self.end_msg("Boost linkage flags auto-detection not implemented (needed ?) for this toolchain")
+			self.fatal('The configuration failed')
+	else:
+		self.start_msg('Checking for boost linkage')
+		try:
+			try_link()
+		except Errors.ConfigurationError as e:
+			self.end_msg("Could not link against boost libraries using supplied options")
+			self.fatal('The configuration failed')
+		self.end_msg('ok')
diff --git a/.waf-tools/coverage.py b/.waf-tools/coverage.py
new file mode 100644
index 0000000..0a3db65
--- /dev/null
+++ b/.waf-tools/coverage.py
@@ -0,0 +1,24 @@
+# -*- Mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8; -*-
+#
+# Copyright (c) 2014, Regents of the University of California
+#
+# GPL 3.0 license, see the COPYING.md file for more information
+
+from waflib import TaskGen
+
+def options(opt):
+    opt.add_option('--with-coverage', action='store_true', default=False, dest='with_coverage',
+                   help='''Set compiler flags for gcc to enable code coverage information''')
+
+def configure(conf):
+    if conf.options.with_coverage:
+        conf.check_cxx(cxxflags=['-fprofile-arcs', '-ftest-coverage', '-fPIC'],
+                       linkflags=['-fprofile-arcs'], uselib_store='GCOV', mandatory=True)
+
+@TaskGen.feature('cxx','cc')
+@TaskGen.after('process_source')
+def add_coverage(self):
+    if getattr(self, 'use', ''):
+        self.use += ' GCOV'
+    else:
+        self.use = 'GCOV'
diff --git a/.waf-tools/default-compiler-flags.py b/.waf-tools/default-compiler-flags.py
new file mode 100644
index 0000000..541c66c
--- /dev/null
+++ b/.waf-tools/default-compiler-flags.py
@@ -0,0 +1,63 @@
+# -*- Mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8; -*-
+#
+# Copyright (c) 2014 University of Memphis,
+#                    Regents of the University of California
+#
+# GPL 3.0 license, see the COPYING.md file for more information
+
+from waflib import Logs, Configure
+
+def options(opt):
+    opt.add_option('--with-c++11', action='store_true', default=False, dest='use_cxx11',
+                   help='''Enable C++11 mode (experimental, may not work)''')
+    opt.add_option('--debug', '--with-debug', action='store_true', default=False, dest='debug',
+                   help='''Compile in debugging mode without all optimizations (-O0)''')
+
+def configure(conf):
+    areCustomCxxflagsPresent = (len(conf.env.CXXFLAGS) > 0)
+    defaultFlags = []
+
+    if conf.options.use_cxx11:
+        defaultFlags += ['-std=c++0x', '-std=c++11']
+    else:
+        defaultFlags += ['-std=c++03']
+
+    # defaultFlags += ['-pedantic', '-Wall', '-Wno-long-long']
+    defaultFlags += ['-Wall', '-Wno-long-long']
+
+    if conf.options.debug:
+        conf.define('_DEBUG', 1)
+        defaultFlags += ['-O0',
+                         '-Og', # gcc >= 4.8
+                         '-g3',
+                         '-fcolor-diagnostics', # clang
+                         '-fdiagnostics-color', # gcc >= 4.9
+                         '-Werror'
+                        ]
+        if areCustomCxxflagsPresent:
+            missingFlags = [x for x in defaultFlags if x not in conf.env.CXXFLAGS]
+            if len(missingFlags) > 0:
+                Logs.warn("Selected debug mode, but CXXFLAGS is set to a custom value '%s'"
+                          % " ".join(conf.env.CXXFLAGS))
+                Logs.warn("Default flags '%s' are not activated" % " ".join(missingFlags))
+        else:
+            conf.add_supported_cxxflags(defaultFlags)
+    else:
+        defaultFlags += ['-O2', '-g']
+        if not areCustomCxxflagsPresent:
+            conf.add_supported_cxxflags(defaultFlags)
+
+@Configure.conf
+def add_supported_cxxflags(self, cxxflags):
+    """
+    Check which cxxflags are supported by compiler and add them to env.CXXFLAGS variable
+    """
+    self.start_msg('Checking allowed flags for c++ compiler')
+
+    supportedFlags = []
+    for flag in cxxflags:
+        if self.check_cxx(cxxflags=[flag], mandatory=False):
+            supportedFlags += [flag]
+
+    self.end_msg(' '.join(supportedFlags))
+    self.env.CXXFLAGS = supportedFlags + self.env.CXXFLAGS
diff --git a/.waf-tools/doxygen.py b/.waf-tools/doxygen.py
new file mode 100644
index 0000000..ac8c70b
--- /dev/null
+++ b/.waf-tools/doxygen.py
@@ -0,0 +1,214 @@
+#! /usr/bin/env python
+# encoding: UTF-8
+# Thomas Nagy 2008-2010 (ita)
+
+"""
+
+Doxygen support
+
+Variables passed to bld():
+* doxyfile -- the Doxyfile to use
+
+When using this tool, the wscript will look like:
+
+	def options(opt):
+		opt.load('doxygen')
+
+	def configure(conf):
+		conf.load('doxygen')
+		# check conf.env.DOXYGEN, if it is mandatory
+
+	def build(bld):
+		if bld.env.DOXYGEN:
+			bld(features="doxygen", doxyfile='Doxyfile', ...)
+
+        def doxygen(bld):
+		if bld.env.DOXYGEN:
+			bld(features="doxygen", doxyfile='Doxyfile', ...)
+"""
+
+from fnmatch import fnmatchcase
+import os, os.path, re, stat
+from waflib import Task, Utils, Node, Logs, Errors, Build
+from waflib.TaskGen import feature
+
+DOXY_STR = '"${DOXYGEN}" - '
+DOXY_FMTS = 'html latex man rft xml'.split()
+DOXY_FILE_PATTERNS = '*.' + ' *.'.join('''
+c cc cxx cpp c++ java ii ixx ipp i++ inl h hh hxx hpp h++ idl odl cs php php3
+inc m mm py f90c cc cxx cpp c++ java ii ixx ipp i++ inl h hh hxx
+'''.split())
+
+re_rl = re.compile('\\\\\r*\n', re.MULTILINE)
+re_nl = re.compile('\r*\n', re.M)
+def parse_doxy(txt):
+	tbl = {}
+	txt   = re_rl.sub('', txt)
+	lines = re_nl.split(txt)
+	for x in lines:
+		x = x.strip()
+		if not x or x.startswith('#') or x.find('=') < 0:
+			continue
+		if x.find('+=') >= 0:
+			tmp = x.split('+=')
+			key = tmp[0].strip()
+			if key in tbl:
+				tbl[key] += ' ' + '+='.join(tmp[1:]).strip()
+			else:
+				tbl[key] = '+='.join(tmp[1:]).strip()
+		else:
+			tmp = x.split('=')
+			tbl[tmp[0].strip()] = '='.join(tmp[1:]).strip()
+	return tbl
+
+class doxygen(Task.Task):
+	vars  = ['DOXYGEN', 'DOXYFLAGS']
+	color = 'BLUE'
+
+	def runnable_status(self):
+		'''
+		self.pars are populated in runnable_status - because this function is being
+		run *before* both self.pars "consumers" - scan() and run()
+
+		set output_dir (node) for the output
+		'''
+
+		for x in self.run_after:
+			if not x.hasrun:
+				return Task.ASK_LATER
+
+		if not getattr(self, 'pars', None):
+			txt = self.inputs[0].read()
+			self.pars = parse_doxy(txt)
+			if not self.pars.get('OUTPUT_DIRECTORY'):
+				self.pars['OUTPUT_DIRECTORY'] = self.inputs[0].parent.get_bld().abspath()
+
+			# Override with any parameters passed to the task generator
+			if getattr(self.generator, 'pars', None):
+				for k, v in self.generator.pars.iteritems():
+					self.pars[k] = v
+
+			self.doxy_inputs = getattr(self, 'doxy_inputs', [])
+			if not self.pars.get('INPUT'):
+				self.doxy_inputs.append(self.inputs[0].parent)
+			else:
+				for i in self.pars.get('INPUT').split():
+					if os.path.isabs(i):
+						node = self.generator.bld.root.find_node(i)
+					else:
+						node = self.generator.path.find_node(i)
+					if not node:
+						self.generator.bld.fatal('Could not find the doxygen input %r' % i)
+					self.doxy_inputs.append(node)
+
+		if not getattr(self, 'output_dir', None):
+			bld = self.generator.bld
+			# First try to find an absolute path, then find or declare a relative path
+			self.output_dir = bld.root.find_dir(self.pars['OUTPUT_DIRECTORY'])
+			if not self.output_dir:
+				self.output_dir = bld.path.find_or_declare(self.pars['OUTPUT_DIRECTORY'])
+
+		self.signature()
+		return Task.Task.runnable_status(self)
+
+	def scan(self):
+		exclude_patterns = self.pars.get('EXCLUDE_PATTERNS','').split()
+		file_patterns = self.pars.get('FILE_PATTERNS','').split()
+		if not file_patterns:
+			file_patterns = DOXY_FILE_PATTERNS
+		if self.pars.get('RECURSIVE') == 'YES':
+			file_patterns = ["**/%s" % pattern for pattern in file_patterns]
+		nodes = []
+		names = []
+		for node in self.doxy_inputs:
+			if os.path.isdir(node.abspath()):
+				for m in node.ant_glob(incl=file_patterns, excl=exclude_patterns):
+					nodes.append(m)
+			else:
+				nodes.append(node)
+		return (nodes, names)
+
+	def run(self):
+		dct = self.pars.copy()
+		dct['INPUT'] = ' '.join(['"%s"' % x.abspath() for x in self.doxy_inputs])
+		code = '\n'.join(['%s = %s' % (x, dct[x]) for x in self.pars])
+		code = code.encode() # for python 3
+		#fmt = DOXY_STR % (self.inputs[0].parent.abspath())
+		cmd = Utils.subst_vars(DOXY_STR, self.env)
+		env = self.env.env or None
+		proc = Utils.subprocess.Popen(cmd, shell=True, stdin=Utils.subprocess.PIPE, env=env, cwd=self.generator.bld.path.get_bld().abspath())
+		proc.communicate(code)
+		return proc.returncode
+
+	def post_run(self):
+		nodes = self.output_dir.ant_glob('**/*', quiet=True)
+		for x in nodes:
+			x.sig = Utils.h_file(x.abspath())
+		self.outputs += nodes
+		return Task.Task.post_run(self)
+
+class tar(Task.Task):
+	"quick tar creation"
+	run_str = '${TAR} ${TAROPTS} ${TGT} ${SRC}'
+	color   = 'RED'
+	after   = ['doxygen']
+	def runnable_status(self):
+		for x in getattr(self, 'input_tasks', []):
+			if not x.hasrun:
+				return Task.ASK_LATER
+
+		if not getattr(self, 'tar_done_adding', None):
+			# execute this only once
+			self.tar_done_adding = True
+			for x in getattr(self, 'input_tasks', []):
+				self.set_inputs(x.outputs)
+			if not self.inputs:
+				return Task.SKIP_ME
+		return Task.Task.runnable_status(self)
+
+	def __str__(self):
+		tgt_str = ' '.join([a.nice_path(self.env) for a in self.outputs])
+		return '%s: %s\n' % (self.__class__.__name__, tgt_str)
+
+@feature('doxygen')
+def process_doxy(self):
+	if not getattr(self, 'doxyfile', None):
+		self.generator.bld.fatal('no doxyfile??')
+
+	node = self.doxyfile
+	if not isinstance(node, Node.Node):
+		node = self.path.find_resource(node)
+	if not node:
+		raise ValueError('doxygen file not found')
+
+	# the task instance
+	dsk = self.create_task('doxygen', node)
+
+	if getattr(self, 'doxy_tar', None):
+		tsk = self.create_task('tar')
+		tsk.input_tasks = [dsk]
+		tsk.set_outputs(self.path.find_or_declare(self.doxy_tar))
+		if self.doxy_tar.endswith('bz2'):
+			tsk.env['TAROPTS'] = ['cjf']
+		elif self.doxy_tar.endswith('gz'):
+			tsk.env['TAROPTS'] = ['czf']
+		else:
+			tsk.env['TAROPTS'] = ['cf']
+
+def configure(conf):
+	'''
+	Check if doxygen and tar commands are present in the system
+
+	If the commands are present, then conf.env.DOXYGEN and conf.env.TAR
+	variables will be set. Detection can be controlled by setting DOXYGEN and
+	TAR environmental variables.
+	'''
+
+	conf.find_program('doxygen', var='DOXYGEN', mandatory=False)
+	conf.find_program('tar', var='TAR', mandatory=False)
+
+# doxygen docs
+from waflib.Build import BuildContext
+class doxy(BuildContext):
+    cmd = "doxygen"
+    fun = "doxygen"
diff --git a/.waf-tools/openssl.py b/.waf-tools/openssl.py
new file mode 100644
index 0000000..e2ba7d0
--- /dev/null
+++ b/.waf-tools/openssl.py
@@ -0,0 +1,46 @@
+#! /usr/bin/env python
+# encoding: utf-8
+
+'''
+
+When using this tool, the wscript will look like:
+
+    def options(opt):
+        opt.tool_options('openssl')
+
+    def configure(conf):
+        conf.load('compiler_cxx openssl')
+        conf.check_openssl()
+
+    def build(bld):
+        bld(source='main.cpp', target='app', use='OPENSSL')
+
+'''
+
+from waflib import Options
+from waflib.Configure import conf
+
+@conf
+def check_openssl(self,*k,**kw):
+    root = k and k[0] or kw.get('path', None) or Options.options.with_openssl
+    mandatory = kw.get('mandatory', True)
+    var = kw.get('uselib_store', 'OPENSSL')
+
+    if root:
+        libcrypto = self.check_cxx(lib=['ssl', 'crypto'],
+                       msg='Checking for OpenSSL library',
+                       define_name='HAVE_%s' % var,
+                       uselib_store=var,
+                       mandatory=mandatory,
+                       cxxflags="-I%s/include" % root,
+                       linkflags="-L%s/lib" % root)
+    else:
+        libcrypto = self.check_cxx(lib=['ssl', 'crypto'],
+                       msg='Checking for OpenSSL library',
+                       define_name='HAVE_%s' % var,
+                       uselib_store=var,
+                       mandatory=mandatory)
+
+def options(opt):
+    opt.add_option('--with-openssl', type='string', default=None,
+                   dest='with_openssl', help='''Path to OpenSSL''')
diff --git a/.waf-tools/protoc.py b/.waf-tools/protoc.py
new file mode 100644
index 0000000..fc4e445
--- /dev/null
+++ b/.waf-tools/protoc.py
@@ -0,0 +1,47 @@
+#!/usr/bin/env python
+# encoding: utf-8
+# Philipp Bender, 2012
+# Matt Clarkson, 2012
+
+from waflib.Task import Task
+from waflib.TaskGen import extension 
+
+"""
+A simple tool to integrate protocol buffers into your build system.
+
+    def configure(conf):
+        conf.load('compiler_cxx cxx protoc')
+
+    def build(bld):
+        bld(
+                features = 'cxx cxxprogram'
+                source   = 'main.cpp file1.proto proto/file2.proto', 
+                include  = '. proto',
+                target   = 'executable') 
+
+"""
+
+class protoc(Task):
+	run_str = '${PROTOC} ${PROTOC_FLAGS} ${PROTOC_ST:INCPATHS} ${SRC[0].abspath()}'
+	color   = 'BLUE'
+	ext_out = ['.h', 'pb.cc']
+
+@extension('.proto')
+def process_protoc(self, node):
+	cpp_node = node.change_ext('.pb.cc')
+	hpp_node = node.change_ext('.pb.h')
+	self.create_task('protoc', node, [cpp_node, hpp_node])
+	self.source.append(cpp_node)
+
+	if 'cxx' in self.features and not self.env.PROTOC_FLAGS:
+		self.env.PROTOC_FLAGS = '--cpp_out=%s' % node.parent.get_bld().abspath()
+
+	use = getattr(self, 'use', '')
+	if not 'PROTOBUF' in use:
+		self.use = self.to_list(use) + ['PROTOBUF']
+
+def configure(conf):
+	conf.check_cfg(package="protobuf", uselib_store="PROTOBUF", args=['--cflags', '--libs'])
+	conf.find_program('protoc', var='PROTOC')
+	conf.env.PROTOC_ST = '-I%s'
+
diff --git a/.waf-tools/sphinx_build.py b/.waf-tools/sphinx_build.py
new file mode 100644
index 0000000..09f67f8
--- /dev/null
+++ b/.waf-tools/sphinx_build.py
@@ -0,0 +1,76 @@
+#!/usr/bin/env python
+# encoding: utf-8
+# Hans-Martin von Gaudecker, 2012
+
+import os
+from waflib import Node, Task, TaskGen, Errors, Logs, Build, Utils
+
+class sphinx_build(Task.Task):
+    color = 'BLUE'
+    run_str = '${SPHINX_BUILD} -q -b ${BUILDERNAME} -d ${DOCTREEDIR} ${SRCDIR} ${OUTDIR}'
+
+    def __str__(self):
+        env = self.env
+        src_str = ' '.join([a.nice_path()for a in self.inputs])
+        tgt_str = ' '.join([a.nice_path()for a in self.outputs])
+        if self.outputs: sep = ' -> '
+        else: sep = ''
+        return'%s [%s]: %s%s%s\n'%(self.__class__.__name__.replace('_task',''),
+                                   self.env['BUILDERNAME'], src_str, sep, tgt_str)
+
+@TaskGen.extension('.py', '.rst')
+def sig_hook(self, node):
+    node.sig=Utils.h_file(node.abspath())
+
+@TaskGen.feature("sphinx")
+@TaskGen.before_method("process_source")
+def apply_sphinx(self):
+    """Set up the task generator with a Sphinx instance and create a task."""
+
+    inputs = []
+    for i in Utils.to_list(self.source):
+        if not isinstance(i, Node.Node):
+            node = self.path.find_node(node)
+        else:
+            node = i
+        if not node:
+            raise ValueError('[%s] file not found' % i)
+        inputs.append(node)
+
+    task = self.create_task('sphinx_build', inputs)
+
+    conf = self.path.find_node(self.config)
+    task.inputs.append(conf)
+
+    confdir = conf.parent.abspath()
+    buildername = getattr(self, "builder", "html")
+    srcdir = getattr(self, "srcdir", confdir)
+    outdir = self.path.find_or_declare(getattr(self, "outdir", buildername)).get_bld()
+    doctreedir = getattr(self, "doctreedir", os.path.join(outdir.abspath(), ".doctrees"))
+
+    task.env['BUILDERNAME'] = buildername
+    task.env['SRCDIR'] = srcdir
+    task.env['DOCTREEDIR'] = doctreedir
+    task.env['OUTDIR'] = outdir.abspath()
+
+    import imp
+    confData = imp.load_source('sphinx_conf', conf.abspath())
+
+    if buildername == "man":
+        for i in confData.man_pages:
+            target = outdir.find_or_declare('%s.%d' % (i[1], i[4]))
+            task.outputs.append(target)
+
+            if self.install_path:
+                self.bld.install_files("%s/man%d/" % (self.install_path, i[4]), target)
+    else:
+        task.outputs.append(outdir)
+
+def configure(conf):
+    conf.find_program('sphinx-build', var='SPHINX_BUILD', mandatory=False)
+
+# sphinx docs
+from waflib.Build import BuildContext
+class sphinx(BuildContext):
+    cmd = "sphinx"
+    fun = "sphinx"